Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4441 | Not Available | Negative | 5465957 - 5466244 | 10717.9 |
| rna polymerase, sigma subunit, ecf family | SAMN04488090_4442 | Not Available | Negative | 5466511 - 5467131 | 23962.1 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04488090_4443 | Not Available | Positive | 5467355 - 5468986 | 60305.8 |
| xtp/ditp diphosphohydrolase | SAMN04488090_4444 | Not Available | Positive | 5469059 - 5469895 | 32289.3 |
| transcriptional regulator, arac family | SAMN04488090_4445 | Not Available | Positive | 5469963 - 5471036 | 40351.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_4446 | Not Available | Positive | 5471166 - 5473511 | 86686.5 |
| hypothetical protein | SAMN04488090_4447 | Not Available | Positive | 5473633 - 5474889 | 45385.4 |
| laci family transcriptional regulator | SAMN04488090_4448 | Not Available | Negative | 5474894 - 5476057 | 44678.6 |
| fucose permease | SAMN04488090_4449 | Not Available | Negative | 5476089 - 5477333 | 45045.4 |
| glucokinase | SAMN04488090_4450 | Not Available | Negative | 5477333 - 5478184 | 30563.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
