Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide transporter, pst family | SAMN04488090_4431 | Not Available | Negative | 5455790 - 5457226 | 53487.4 |
| hypothetical protein | SAMN04488090_4432 | Not Available | Negative | 5457391 - 5459100 | 65091.2 |
| uracil phosphoribosyltransferase | SAMN04488090_4433 | Not Available | Positive | 5459206 - 5459850 | 23852.7 |
| hypothetical protein | SAMN04488090_4434 | Not Available | Positive | 5459853 - 5460305 | 16731.3 |
| gaf domain-containing protein | SAMN04488090_4435 | Not Available | Negative | 5460288 - 5460788 | 18188.6 |
| transcriptional regulator, laci family | SAMN04488090_4436 | Not Available | Negative | 5460791 - 5461798 | 37855.6 |
| galactokinase | SAMN04488090_4437 | Not Available | Positive | 5462369 - 5463529 | 43431.0 |
| udpglucose--hexose-1-phosphate uridylyltransferase | SAMN04488090_4438 | Not Available | Positive | 5463542 - 5464582 | 40031.3 |
| hypothetical protein | SAMN04488090_4439 | Not Available | Negative | 5464728 - 5465219 | 18023.2 |
| guanylate kinase | SAMN04488090_4440 | Not Available | Negative | 5465232 - 5465810 | 22107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
