Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488090_4421 | Not Available | Negative | 5445348 - 5446511 | 44071.0 |
| chromosome partitioning atpase, mrp family, contains fe-s cluster | SAMN04488090_4422 | Not Available | Negative | 5446516 - 5448648 | 80455.8 |
| outer membrane efflux protein | SAMN04488090_4423 | Not Available | Negative | 5448651 - 5449331 | 25904.6 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488090_4424 | Not Available | Negative | 5449340 - 5450509 | 44606.3 |
| response regulator receiver domain-containing protein | SAMN04488090_4425 | Not Available | Negative | 5450540 - 5450938 | 14706.0 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04488090_4426 | Not Available | Negative | 5451315 - 5451938 | 22936.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_4427 | Not Available | Negative | 5451935 - 5453128 | 44420.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_4428 | Not Available | Negative | 5453132 - 5453905 | 30005.4 |
| glycosyl transferase family 2 | SAMN04488090_4429 | Not Available | Negative | 5453910 - 5454698 | 30845.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488090_4430 | Not Available | Negative | 5454695 - 5455786 | 41647.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
