Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-paratose 2-epimerase | SAMN04488090_4411 | Not Available | Negative | 5433860 - 5434930 | 40403.4 |
| hypothetical protein | SAMN04488090_4412 | Not Available | Negative | 5435093 - 5435341 | 9121.99 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488090_4413 | Not Available | Positive | 5435542 - 5436720 | 44565.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4414 | Not Available | Negative | 5436766 - 5440143 | 123856.0 |
| glycosyl transferase family 2 | SAMN04488090_4415 | Not Available | Positive | 5440319 - 5441161 | 31367.8 |
| hypothetical protein | SAMN04488090_4416 | Not Available | Positive | 5441165 - 5442058 | 33709.3 |
| core-2/i-branching enzyme | SAMN04488090_4417 | Not Available | Positive | 5442061 - 5442900 | 32426.6 |
| glycosyl transferase family 11 | SAMN04488090_4418 | Not Available | Negative | 5442883 - 5443755 | 33924.3 |
| o-antigen ligase like membrane protein | SAMN04488090_4419 | Not Available | Negative | 5443752 - 5445200 | 54374.0 |
| hypothetical protein | SAMN04488090_4420 | Not Available | Negative | 5445200 - 5445343 | 5602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
