Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN04488090_0432 | Not Available | Positive | 570885 - 571625 | 27779.7 |
| nucleoside transporter | SAMN04488090_0433 | Not Available | Positive | 571622 - 572782 | 41938.6 |
| adp-ribosylglycohydrolase | SAMN04488090_0434 | Not Available | Positive | 572775 - 574292 | 56968.0 |
| hypothetical protein | SAMN04488090_0435 | Not Available | Positive | 574338 - 574652 | 11536.1 |
| hypothetical protein | SAMN04488090_0436 | Not Available | Positive | 574796 - 575599 | 28969.3 |
| starch-binding associating with outer membrane | SAMN04488090_0437 | Not Available | Negative | 575631 - 577043 | 51446.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0438 | Not Available | Negative | 577056 - 580178 | 113406.0 |
| vitamin b12 transporter | SAMN04488090_0439 | Not Available | Negative | 580447 - 582561 | 76863.5 |
| hupe / urej protein | SAMN04488090_0440 | Not Available | Negative | 582579 - 583178 | 21330.4 |
| iron complex outermembrane recepter protein | SAMN04488090_0441 | Not Available | Positive | 583943 - 586294 | 86121.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
