Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucyl-trna synthetase | SAMN04488090_4401 | Not Available | Positive | 5418440 - 5421862 | 129673.0 |
| peptide-n-glycosidase f, c terminal | SAMN04488090_4402 | Not Available | Negative | 5421931 - 5423817 | 71054.1 |
| 3-hydroxyacyl-coa dehydrogenase / enoyl-coa hydratase / 3-hydroxybutyryl-coa epimerase | SAMN04488090_4403 | Not Available | Negative | 5424093 - 5426201 | 75505.2 |
| acetyl-coa c-acetyltransferase | SAMN04488090_4404 | Not Available | Negative | 5426205 - 5427410 | 42064.8 |
| lsu ribosomal protein l28p | SAMN04488090_4405 | Not Available | Positive | 5427706 - 5427933 | 8517.52 |
| hypothetical protein | SAMN04488090_4406 | Not Available | Positive | 5428004 - 5428951 | 35863.0 |
| carbon-nitrogen hydrolase | SAMN04488090_4407 | Not Available | Positive | 5429041 - 5430177 | 41804.3 |
| 2og-fe(ii) oxygenase superfamily protein | SAMN04488090_4408 | Not Available | Positive | 5430283 - 5431134 | 32721.3 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04488090_4409 | Not Available | Positive | 5431177 - 5432835 | 63997.6 |
| dolichol-phosphate mannosyltransferase | SAMN04488090_4410 | Not Available | Negative | 5432879 - 5433643 | 29300.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
