Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4391 | Not Available | Positive | 5405719 - 5405979 | 9422.44 |
| putative hydrolase of the had superfamily | SAMN04488090_4392 | Not Available | Negative | 5405962 - 5406663 | 26783.6 |
| hypothetical protein | SAMN04488090_4393 | Not Available | Negative | 5406635 - 5407252 | 24381.0 |
| valyl-trna synthetase | SAMN04488090_4394 | Not Available | Negative | 5407456 - 5410158 | 103077.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04488090_4395 | Not Available | Positive | 5410264 - 5411049 | 30580.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN04488090_4396 | Not Available | Positive | 5411079 - 5411366 | 10765.9 |
| carbon-nitrogen hydrolase | SAMN04488090_4397 | Not Available | Negative | 5411517 - 5412299 | 29756.1 |
| hypothetical protein | SAMN04488090_4398 | Not Available | Positive | 5412397 - 5413623 | 46199.8 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488090_4399 | Not Available | Negative | 5413626 - 5416007 | 85306.7 |
| atp-dependent dna helicase recg | SAMN04488090_4400 | Not Available | Positive | 5416203 - 5418302 | 80324.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
