Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | SAMN04488090_4381 | Not Available | Positive | 5395626 - 5396543 | 34018.7 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488090_4382 | Not Available | Negative | 5396540 - 5397418 | 33949.6 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN04488090_4383 | Not Available | Positive | 5397604 - 5398758 | 43058.4 |
| nadh dehydrogenase | SAMN04488090_4384 | Not Available | Positive | 5398785 - 5400113 | 49236.2 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488090_4385 | Not Available | Positive | 5400199 - 5400855 | 24971.5 |
| exonuclease recj | SAMN04488090_4386 | Not Available | Positive | 5400975 - 5402696 | 65123.3 |
| lipopolysaccharide export system atp-binding protein | SAMN04488090_4387 | Not Available | Positive | 5402720 - 5403454 | 27283.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04488090_4388 | Not Available | Positive | 5403531 - 5404694 | 42165.2 |
| protein of unknown function | SAMN04488090_4389 | Not Available | Positive | 5404698 - 5405378 | 25576.7 |
| hypothetical protein | SAMN04488090_4390 | Not Available | Positive | 5405375 - 5405722 | 13235.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
