Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN04488090_4371 | Not Available | Positive | 5385007 - 5386572 | 58963.3 |
| hypothetical protein | SAMN04488090_4372 | Not Available | Negative | 5386603 - 5386770 | 6158.54 |
| hypothetical protein | SAMN04488090_4373 | Not Available | Positive | 5386919 - 5387209 | 10900.0 |
| hypothetical protein | SAMN04488090_4374 | Not Available | Positive | 5387303 - 5388076 | 29438.1 |
| Trna-gln | Not Available | Not Available | Positive | 5388189 - 5388262 | Not Available |
| metallo-peptidase family m12b reprolysin-like | SAMN04488090_4376 | Not Available | Negative | 5388409 - 5391564 | 110282.0 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN04488090_4377 | Not Available | Negative | 5391721 - 5392614 | 31542.8 |
| predicted thiol-disulfide oxidoreductase yuxk, dcc family | SAMN04488090_4378 | Not Available | Negative | 5392659 - 5393081 | 16456.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488090_4379 | Not Available | Negative | 5393298 - 5394370 | 39569.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488090_4380 | Not Available | Positive | 5394828 - 5395616 | 27641.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
