Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN04488090_4361 | Not Available | Positive | 5376381 - 5377418 | 37006.8 |
| cobalamin-5'-phosphate synthase | SAMN04488090_4362 | Not Available | Positive | 5377437 - 5378204 | 27789.2 |
| alpha-ribazole phosphatase | SAMN04488090_4363 | Not Available | Positive | 5378189 - 5378767 | 21492.5 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04488090_4364 | Not Available | Positive | 5378779 - 5379897 | 40936.8 |
| rhodanese-related sulfurtransferase | SAMN04488090_4365 | Not Available | Negative | 5379882 - 5380172 | 10722.0 |
| rhodanese-related sulfurtransferase | SAMN04488090_4366 | Not Available | Negative | 5380274 - 5380567 | 11028.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4367 | Not Available | Negative | 5380592 - 5382457 | 69587.3 |
| pasta domain, binds beta-lactams | SAMN04488090_4368 | Not Available | Negative | 5382470 - 5383276 | 29360.4 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488090_4369 | Not Available | Positive | 5383456 - 5383896 | 16111.6 |
| putative iron-dependent peroxidase | SAMN04488090_4370 | Not Available | Positive | 5383937 - 5384881 | 34701.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
