Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00266 family protein | SAMN04488090_4341 | Not Available | Positive | 5352096 - 5352878 | 27757.6 |
| protein involved in gliding motility gldd | SAMN04488090_4342 | Not Available | Positive | 5353357 - 5353914 | 21127.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488090_4343 | Not Available | Positive | 5353924 - 5354478 | 21208.2 |
| molybdate transport system atp-binding protein | SAMN04488090_4344 | Not Available | Positive | 5354709 - 5356169 | 54400.2 |
| hypothetical protein | SAMN04488090_4345 | Not Available | Positive | 5356247 - 5358208 | 72813.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_4346 | Not Available | Negative | 5358194 - 5359303 | 42419.3 |
| uncharacterized fe-s cluster protein yjdi | SAMN04488090_4347 | Not Available | Negative | 5359303 - 5359521 | 8353.94 |
| protein of unknown function | SAMN04488090_4348 | Not Available | Positive | 5359846 - 5360388 | 20804.9 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN04488090_4349 | Not Available | Negative | 5360397 - 5360963 | 20658.8 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488090_4350 | Not Available | Negative | 5360984 - 5361478 | 18697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
