Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04488090_4321 | Not Available | Positive | 5322141 - 5322902 | 28686.7 |
| two component regulator propeller | SAMN04488090_4322 | Not Available | Negative | 5322914 - 5326057 | 117743.0 |
| hypothetical protein | SAMN04488090_4323 | Not Available | Positive | 5327210 - 5328309 | 39066.5 |
| hypothetical protein | SAMN04488090_4324 | Not Available | Positive | 5329328 - 5329930 | 20607.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4325 | Not Available | Positive | 5329959 - 5331008 | 37528.4 |
| hypothetical protein | SAMN04488090_4326 | Not Available | Positive | 5331193 - 5331579 | 15011.0 |
| hypothetical protein | SAMN04488090_4327 | Not Available | Negative | 5331680 - 5333350 | 63920.7 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488090_4328 | Not Available | Negative | 5333496 - 5334383 | 34610.5 |
| protein of unknown function | SAMN04488090_4329 | Not Available | Negative | 5334401 - 5334919 | 19813.9 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN04488090_4330 | Not Available | Negative | 5334989 - 5336110 | 42797.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
