Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4301 | Not Available | Positive | 5298529 - 5299008 | 18603.1 |
| predicted dehydrogenase | SAMN04488090_4302 | Not Available | Negative | 5299077 - 5300426 | 50139.4 |
| protein of unknown function | SAMN04488090_4303 | Not Available | Negative | 5300515 - 5301948 | 53040.7 |
| dihydrofolate reductase | SAMN04488090_4304 | Not Available | Negative | 5302263 - 5302784 | 19535.5 |
| transcriptional regulator, arac family | SAMN04488090_4305 | Not Available | Negative | 5302821 - 5303684 | 31798.1 |
| 2-keto-myo-inositol dehydratase | SAMN04488090_4306 | Not Available | Negative | 5303719 - 5304627 | 33096.6 |
| asma-like c-terminal region | SAMN04488090_4307 | Not Available | Negative | 5304679 - 5307201 | 96674.8 |
| dipeptidyl-peptidase-4 | SAMN04488090_4308 | Not Available | Positive | 5307328 - 5309370 | 76328.1 |
| (2fe-2s) ferredoxin | SAMN04488090_4309 | Not Available | Negative | 5309493 - 5309765 | 10549.8 |
| hypothetical protein | SAMN04488090_4310 | Not Available | Positive | 5309858 - 5310589 | 25935.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
