Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate 2-monooxygenase | SAMN04488090_4291 | Not Available | Positive | 5290260 - 5291519 | 45810.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488090_4292 | Not Available | Positive | 5291703 - 5292908 | 43937.4 |
| protein of unknown function | SAMN04488090_4293 | Not Available | Positive | 5292924 - 5293133 | 7977.44 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN04488090_4294 | Not Available | Positive | 5293137 - 5293523 | 14766.8 |
| alcohol dehydrogenase, class iv | SAMN04488090_4295 | Not Available | Positive | 5293549 - 5294628 | 40108.1 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN04488090_4296 | Not Available | Positive | 5294686 - 5295537 | 31391.0 |
| hypothetical protein | SAMN04488090_4297 | Not Available | Positive | 5295736 - 5296137 | 15728.5 |
| sugar phosphate isomerase/epimerase | SAMN04488090_4298 | Not Available | Negative | 5296245 - 5297117 | 32536.1 |
| riboflavin synthase alpha chain | SAMN04488090_4299 | Not Available | Negative | 5297260 - 5297850 | 21682.5 |
| hypothetical protein | SAMN04488090_4300 | Not Available | Positive | 5297909 - 5298514 | 22547.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
