Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_4281 | Not Available | Negative | 5279787 - 5280227 | 16488.1 |
| protein of unknown function | SAMN04488090_4282 | Not Available | Negative | 5280263 - 5281150 | 31714.7 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04488090_4283 | Not Available | Negative | 5281246 - 5283675 | 89862.4 |
| hydroxypyruvate isomerase | SAMN04488090_4284 | Not Available | Negative | 5284403 - 5285266 | 31584.8 |
| hypothetical protein | SAMN04488090_4285 | Not Available | Negative | 5285335 - 5285616 | 10378.5 |
| histidine triad (hit) family protein | SAMN04488090_4286 | Not Available | Negative | 5285620 - 5286015 | 14504.8 |
| transcription elongation factor grea | SAMN04488090_4287 | Not Available | Negative | 5286224 - 5286697 | 17066.5 |
| methionyl-trna formyltransferase | SAMN04488090_4288 | Not Available | Positive | 5287136 - 5288098 | 35814.1 |
| l-serine dehydratase | SAMN04488090_4289 | Not Available | Positive | 5288158 - 5289510 | 48058.1 |
| dihydrofolate reductase | SAMN04488090_4290 | Not Available | Positive | 5289688 - 5290155 | 17326.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
