Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l13p | SAMN04488090_4271 | Not Available | Positive | 5271788 - 5272231 | 16488.0 |
| ssu ribosomal protein s9p | SAMN04488090_4272 | Not Available | Positive | 5272283 - 5272672 | 14517.6 |
| ssu ribosomal protein s2p | SAMN04488090_4273 | Not Available | Positive | 5272809 - 5273627 | 29909.1 |
| translation elongation factor ts (ef-ts) | SAMN04488090_4274 | Not Available | Positive | 5273784 - 5274620 | 29764.9 |
| protein of unknown function | SAMN04488090_4275 | Not Available | Positive | 5274819 - 5275754 | 35662.4 |
| large conductance mechanosensitive channel | SAMN04488090_4276 | Not Available | Positive | 5275785 - 5276126 | 12058.1 |
| large conductance mechanosensitive channel | SAMN04488090_4277 | Not Available | Positive | 5276260 - 5276679 | 15425.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04488090_4278 | Not Available | Positive | 5276745 - 5278109 | 49311.8 |
| hypothetical protein | SAMN04488090_4279 | Not Available | Positive | 5278114 - 5278779 | 24982.7 |
| nadph:quinone reductase | SAMN04488090_4280 | Not Available | Positive | 5278788 - 5279792 | 35865.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
