Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7tm diverse intracellular signalling | SAMN04488090_4261 | Not Available | Positive | 5259950 - 5261344 | 53783.9 |
| two component transcriptional regulator, lyttr family | SAMN04488090_4262 | Not Available | Positive | 5261374 - 5262120 | 28675.9 |
| hypothetical protein | SAMN04488090_4263 | Not Available | Positive | 5262233 - 5262754 | 18015.5 |
| hypothetical protein | SAMN04488090_4264 | Not Available | Positive | 5262881 - 5263519 | 23130.3 |
| dihydroorotase | SAMN04488090_4265 | Not Available | Positive | 5263588 - 5265045 | 53225.7 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488090_4266 | Not Available | Negative | 5265058 - 5265978 | 33735.6 |
| cytochrome c | SAMN04488090_4267 | Not Available | Negative | 5266139 - 5266513 | 13451.8 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488090_4268 | Not Available | Negative | 5266627 - 5267451 | 29154.3 |
| hypothetical protein | SAMN04488090_4269 | Not Available | Negative | 5267722 - 5268408 | 25364.3 |
| excinuclease abc subunit a | SAMN04488090_4270 | Not Available | Positive | 5268742 - 5271597 | 105613.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
