Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted zn-dependent peptidase | SAMN04488090_4251 | Not Available | Positive | 5248553 - 5249791 | 45964.4 |
| phosphoheptose isomerase | SAMN04488090_4252 | Not Available | Positive | 5249814 - 5250395 | 21246.5 |
| dihydroxyacid dehydratase | SAMN04488090_4253 | Not Available | Positive | 5250465 - 5252183 | 62208.7 |
| hypothetical protein | SAMN04488090_4254 | Not Available | Negative | 5252282 - 5252515 | 8366.57 |
| hypothetical protein | SAMN04488090_4255 | Not Available | Positive | 5252519 - 5254090 | 58314.0 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN04488090_4256 | Not Available | Positive | 5254339 - 5254980 | 22967.9 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04488090_4257 | Not Available | Positive | 5255665 - 5257026 | 49783.1 |
| protein of unknown function | SAMN04488090_4258 | Not Available | Positive | 5257074 - 5257913 | 32159.2 |
| wd40-like beta propeller repeat | SAMN04488090_4259 | Not Available | Negative | 5257916 - 5259124 | 44567.6 |
| peptide deformylase | SAMN04488090_4260 | Not Available | Negative | 5259128 - 5259709 | 22183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
