Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nte family protein | SAMN04488090_4241 | Not Available | Negative | 5233080 - 5235416 | 86838.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_4242 | Not Available | Negative | 5235420 - 5236394 | 35889.1 |
| hypothetical protein | SAMN04488090_4243 | Not Available | Positive | 5236629 - 5236790 | 6015.81 |
| trehalose 6-phosphate synthase/phosphatase | SAMN04488090_4244 | Not Available | Positive | 5236996 - 5239248 | 85423.0 |
| small-conductance mechanosensitive channel | SAMN04488090_4245 | Not Available | Positive | 5239275 - 5240330 | 38898.1 |
| hypothetical protein | SAMN04488090_4246 | Not Available | Positive | 5240572 - 5240943 | 13668.3 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488090_4247 | Not Available | Positive | 5241070 - 5245434 | 161279.0 |
| barrel-sandwich domain of cusb or hlyd membrane-fusion | SAMN04488090_4248 | Not Available | Positive | 5245438 - 5246625 | 43551.3 |
| hypothetical protein | SAMN04488090_4249 | Not Available | Negative | 5246849 - 5247109 | 9581.9 |
| hypothetical protein | SAMN04488090_4250 | Not Available | Negative | 5247278 - 5248402 | 43520.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
