Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4231 | Not Available | Positive | 5224383 - 5225657 | 47022.9 |
| hypothetical protein | SAMN04488090_4232 | Not Available | Positive | 5225760 - 5227355 | 61002.5 |
| outer membrane protein ompa | SAMN04488090_4233 | Not Available | Positive | 5227352 - 5227996 | 24879.7 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04488090_4234 | Not Available | Positive | 5228103 - 5228906 | 28712.5 |
| cytochrome c oxidase subunit 3 | SAMN04488090_4235 | Not Available | Positive | 5228918 - 5229550 | 24420.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN04488090_4236 | Not Available | Negative | 5229525 - 5230052 | 19694.5 |
| acyl-coa dehydrogenase | SAMN04488090_4237 | Not Available | Negative | 5230049 - 5231137 | 40256.5 |
| dna-binding transcriptional regulator, arsr family | SAMN04488090_4238 | Not Available | Positive | 5231211 - 5231483 | 10326.4 |
| n-ethylmaleimide reductase | SAMN04488090_4239 | Not Available | Positive | 5231574 - 5232668 | 39283.2 |
| uncharacterized conserved protein, duf952 family | SAMN04488090_4240 | Not Available | Negative | 5232746 - 5233036 | 11087.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
