Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04488090_4221 | Not Available | Negative | 5206599 - 5207831 | 46044.4 |
| ferritin | SAMN04488090_4222 | Not Available | Negative | 5207969 - 5208493 | 19889.3 |
| hypothetical protein | SAMN04488090_4223 | Not Available | Negative | 5208890 - 5209261 | 14302.1 |
| iron complex outermembrane recepter protein | SAMN04488090_4224 | Not Available | Positive | 5209671 - 5212022 | 86929.0 |
| iron complex outermembrane recepter protein | SAMN04488090_4225 | Not Available | Positive | 5212132 - 5214540 | 87411.5 |
| tonb-dependent siderophore receptor | SAMN04488090_4226 | Not Available | Positive | 5214627 - 5216975 | 85971.7 |
| hypothetical protein | SAMN04488090_4227 | Not Available | Positive | 5217253 - 5218611 | 49196.8 |
| hypothetical protein | SAMN04488090_4228 | Not Available | Positive | 5218670 - 5219095 | 15953.9 |
| hypothetical protein | SAMN04488090_4229 | Not Available | Positive | 5219187 - 5220722 | 57471.9 |
| hypothetical protein | SAMN04488090_4230 | Not Available | Positive | 5220760 - 5224320 | 135347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
