Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (du1801) | SAMN04488090_4201 | Not Available | Positive | 5176281 - 5176691 | 15251.2 |
| transcriptional regulator, arac family | SAMN04488090_4202 | Not Available | Positive | 5176694 - 5177743 | 38692.3 |
| protein of unknown function | SAMN04488090_4203 | Not Available | Positive | 5177815 - 5178888 | 41230.9 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488090_4204 | Not Available | Negative | 5178944 - 5179792 | 31418.2 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN04488090_4205 | Not Available | Negative | 5179863 - 5181437 | 54331.8 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN04488090_4206 | Not Available | Negative | 5181550 - 5184327 | 103975.0 |
| phytoene desaturase | SAMN04488090_4207 | Not Available | Negative | 5184635 - 5186122 | 55545.2 |
| membrane dipeptidase | SAMN04488090_4208 | Not Available | Positive | 5186246 - 5187502 | 46289.0 |
| hypothetical protein | SAMN04488090_4209 | Not Available | Positive | 5187705 - 5187896 | 7215.0 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04488090_4210 | Not Available | Positive | 5187893 - 5188663 | 29057.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
