Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain | SAMN04488090_4181 | Not Available | Negative | 5149633 - 5152026 | 89631.4 |
| elaa protein | SAMN04488090_4182 | Not Available | Negative | 5152023 - 5152472 | 16637.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488090_4183 | Not Available | Negative | 5152481 - 5153242 | 26814.2 |
| hypothetical protein | SAMN04488090_4184 | Not Available | Negative | 5153354 - 5158405 | 184790.0 |
| ribosomal protein l11 methyltransferase | SAMN04488090_4185 | Not Available | Negative | 5158547 - 5159383 | 31040.6 |
| uncharacterized conserved protein, duf2141 family | SAMN04488090_4186 | Not Available | Negative | 5159432 - 5159890 | 17578.1 |
| hypothetical protein | SAMN04488090_4187 | Not Available | Negative | 5160282 - 5160713 | 15440.3 |
| multidrug efflux pump subunit acrb | SAMN04488090_4188 | Not Available | Negative | 5160801 - 5163848 | 112195.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488090_4189 | Not Available | Negative | 5163862 - 5164947 | 39222.3 |
| outer membrane protein tolc | SAMN04488090_4190 | Not Available | Negative | 5164937 - 5166277 | 50405.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
