Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase | SAMN04488090_4171 | Not Available | Positive | 5132881 - 5134662 | 65956.2 |
| thiamine biosynthesis lipoprotein | SAMN04488090_4172 | Not Available | Positive | 5134663 - 5135643 | 36116.3 |
| hypothetical protein | SAMN04488090_4173 | Not Available | Positive | 5135640 - 5138210 | 95916.8 |
| protein of unknown function | SAMN04488090_4174 | Not Available | Positive | 5138207 - 5138998 | 29246.9 |
| transporter, sss family | SAMN04488090_4175 | Not Available | Positive | 5139085 - 5140791 | 61243.0 |
| beta-glucuronidase | SAMN04488090_4176 | Not Available | Positive | 5140791 - 5142851 | 77858.6 |
| fad dependent oxidoreductase | SAMN04488090_4177 | Not Available | Positive | 5142881 - 5145163 | 84591.6 |
| tryptophan synthase, beta chain | SAMN04488090_4178 | Not Available | Positive | 5145386 - 5146585 | 43105.8 |
| tryptophan synthase, alpha chain | SAMN04488090_4179 | Not Available | Positive | 5146604 - 5147380 | 28225.8 |
| hypothetical protein | SAMN04488090_4180 | Not Available | Negative | 5147880 - 5149504 | 58765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
