Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4141 | Not Available | Positive | 5092183 - 5092992 | 29731.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_4142 | Not Available | Positive | 5093021 - 5094022 | 37228.8 |
| Trna-tyr | Not Available | Not Available | Positive | 5094285 - 5094370 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5094410 - 5094482 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5094596 - 5094667 | Not Available |
| elongation factor tu | SAMN04488090_4146 | Not Available | Positive | 5094830 - 5096014 | 43443.3 |
| Trna-trp | Not Available | Not Available | Positive | 5096303 - 5096373 | Not Available |
| preprotein translocase subunit sece | SAMN04488090_4148 | Not Available | Positive | 5096470 - 5096664 | 7248.83 |
| transcription antitermination protein nusg | SAMN04488090_4149 | Not Available | Positive | 5096750 - 5097313 | 20727.2 |
| lsu ribosomal protein l11p | SAMN04488090_4150 | Not Available | Positive | 5097440 - 5097883 | 15774.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
