Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, permease/atp-binding protein | SAMN04488090_4121 | Not Available | Positive | 5071743 - 5073551 | 66702.9 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04488090_4122 | Not Available | Positive | 5073588 - 5074013 | 16370.6 |
| quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit | SAMN04488090_4123 | Not Available | Positive | 5074382 - 5075608 | 44293.4 |
| quinol:cytochrome c oxidoreductase iron-sulfur protein precursor | SAMN04488090_4124 | Not Available | Positive | 5075665 - 5078733 | 111968.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN04488090_4125 | Not Available | Positive | 5078810 - 5080219 | 53498.3 |
| quinol:cytochrome c oxidoreductase membrane protein | SAMN04488090_4126 | Not Available | Positive | 5080270 - 5080809 | 19926.2 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04488090_4127 | Not Available | Positive | 5080859 - 5081485 | 23109.8 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 2 | SAMN04488090_4128 | Not Available | Positive | 5081559 - 5082872 | 50251.0 |
| cytochrome c oxidase subunit 2 | SAMN04488090_4129 | Not Available | Positive | 5082928 - 5084040 | 40962.6 |
| cytochrome c oxidase subunit 1 | SAMN04488090_4130 | Not Available | Positive | 5084067 - 5085965 | 70426.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
