Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN04488090_0402 | Not Available | Negative | 533361 - 534554 | 42592.9 |
| transcriptional regulator, gntr family | SAMN04488090_0403 | Not Available | Negative | 534613 - 535260 | 24518.3 |
| hypothetical protein | SAMN04488090_0404 | Not Available | Negative | 535595 - 536428 | 31526.7 |
| hypothetical protein | SAMN04488090_0405 | Not Available | Negative | 536428 - 537684 | 48146.8 |
| alpha-l-rhamnosidase | SAMN04488090_0406 | Not Available | Negative | 537802 - 539532 | 64185.9 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04488090_0407 | Not Available | Negative | 539529 - 542699 | 116935.0 |
| lysophospholipase l1 | SAMN04488090_0408 | Not Available | Positive | 542840 - 544753 | 71362.2 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04488090_0409 | Not Available | Negative | 544743 - 546383 | 61487.4 |
| hypothetical protein | SAMN04488090_0410 | Not Available | Negative | 546481 - 547377 | 34004.1 |
| atp-dependent rna helicase rhle | SAMN04488090_0411 | Not Available | Positive | 547492 - 548826 | 50016.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
