Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN04488090_4090 | Not Available | Positive | 5027883 - 5029328 | 53786.6 |
| sigma-70 region 2 | SAMN04488090_4091 | Not Available | Positive | 5029438 - 5030025 | 22887.2 |
| dihydroxy-acid dehydratase | SAMN04488090_4092 | Not Available | Positive | 5030517 - 5032208 | 59853.4 |
| acetolactate synthase, large subunit | SAMN04488090_4093 | Not Available | Positive | 5032252 - 5033994 | 63972.1 |
| acetolactate synthase, small subunit | SAMN04488090_4094 | Not Available | Positive | 5034009 - 5034542 | 20447.7 |
| ketol-acid reductoisomerase | SAMN04488090_4095 | Not Available | Positive | 5034657 - 5035703 | 38439.7 |
| l-threonine ammonia-lyase | SAMN04488090_4096 | Not Available | Positive | 5035850 - 5037115 | 46582.0 |
| hypothetical protein | SAMN04488090_4097 | Not Available | Positive | 5037148 - 5038251 | 41648.9 |
| hypothetical protein | SAMN04488090_4098 | Not Available | Positive | 5038309 - 5038518 | 8120.51 |
| arac-type dna-binding protein | SAMN04488090_4099 | Not Available | Positive | 5038571 - 5039440 | 33777.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
