Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase | SAMN04488090_4070 | Not Available | Negative | 4999521 - 5001257 | 63617.8 |
| starch-binding associating with outer membrane | SAMN04488090_4071 | Not Available | Negative | 5001331 - 5002992 | 62492.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4072 | Not Available | Negative | 5003017 - 5006412 | 124848.0 |
| fecr family protein | SAMN04488090_4073 | Not Available | Negative | 5006466 - 5007449 | 37686.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4074 | Not Available | Negative | 5007505 - 5008134 | 24457.4 |
| glycine dehydrogenase | SAMN04488090_4075 | Not Available | Negative | 5008507 - 5011392 | 104572.0 |
| protein of unknown function | SAMN04488090_4076 | Not Available | Positive | 5011671 - 5012000 | 11968.1 |
| hypothetical protein | SAMN04488090_4077 | Not Available | Negative | 5012028 - 5012384 | 14430.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN04488090_4078 | Not Available | Positive | 5012499 - 5013632 | 41507.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN04488090_4079 | Not Available | Positive | 5013655 - 5014149 | 16972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
