Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate:amp phosphotransferase | SAMN04488090_4060 | Not Available | Negative | 4988711 - 4989604 | 35301.2 |
| peptide-methionine (s)-s-oxide reductase | SAMN04488090_4061 | Not Available | Positive | 4989684 - 4990361 | 25516.2 |
| ketopantoate hydroxymethyltransferase | SAMN04488090_4062 | Not Available | Positive | 4990490 - 4991308 | 29644.8 |
| protein of unknown function | SAMN04488090_4063 | Not Available | Positive | 4991308 - 4991520 | 7944.25 |
| stress responsive a/b barrel domain | SAMN04488090_4064 | Not Available | Positive | 4991610 - 4992011 | 15223.4 |
| iron complex outermembrane recepter protein | SAMN04488090_4065 | Not Available | Negative | 4992051 - 4994357 | 85931.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4066 | Not Available | Positive | 4994506 - 4995018 | 19758.6 |
| phytoene desaturase | SAMN04488090_4067 | Not Available | Positive | 4995213 - 4996688 | 55924.9 |
| phytoene/squalene synthetase | SAMN04488090_4068 | Not Available | Positive | 4996696 - 4997529 | 32491.8 |
| fad dependent oxidoreductase | SAMN04488090_4069 | Not Available | Negative | 4997532 - 4999502 | 72095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
