Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix motif-containing protein | SAMN04488090_4050 | Not Available | Negative | 4976314 - 4978308 | 74456.4 |
| wd40-like beta propeller repeat | SAMN04488090_4051 | Not Available | Negative | 4978431 - 4980440 | 74117.1 |
| 23s rrna pseudouridine2605 synthase | SAMN04488090_4052 | Not Available | Positive | 4980792 - 4982276 | 56308.7 |
| protein of unknown function | SAMN04488090_4053 | Not Available | Negative | 4982321 - 4982635 | 11958.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_4054 | Not Available | Positive | 4982870 - 4984087 | 46089.9 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN04488090_4055 | Not Available | Positive | 4984138 - 4984665 | 20101.3 |
| protein of unknown function | SAMN04488090_4056 | Not Available | Positive | 4984797 - 4985417 | 23386.3 |
| oprf membrane domain-containing protein | SAMN04488090_4057 | Not Available | Positive | 4985446 - 4986135 | 26119.7 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN04488090_4058 | Not Available | Positive | 4986755 - 4987621 | 33411.9 |
| conserved hypothetical protein | SAMN04488090_4059 | Not Available | Positive | 4987629 - 4988714 | 41557.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
