Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04488090_4040 | Not Available | Positive | 4957786 - 4961526 | 136901.0 |
| hypothetical protein | SAMN04488090_4041 | Not Available | Positive | 4961646 - 4961969 | 11890.7 |
| starch-binding associating with outer membrane | SAMN04488090_4042 | Not Available | Negative | 4962050 - 4963699 | 61548.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4043 | Not Available | Negative | 4963709 - 4966831 | 115176.0 |
| starch-binding associating with outer membrane | SAMN04488090_4044 | Not Available | Negative | 4967478 - 4969031 | 57362.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4045 | Not Available | Negative | 4969058 - 4972372 | 120656.0 |
| thymidine kinase | SAMN04488090_4046 | Not Available | Negative | 4972688 - 4973272 | 21601.0 |
| gdpmannose 4,6-dehydratase | SAMN04488090_4047 | Not Available | Negative | 4973343 - 4974455 | 41990.2 |
| sporulation related domain-containing protein | SAMN04488090_4048 | Not Available | Negative | 4974593 - 4974967 | 14240.8 |
| udp-n-acetylmuramate dehydrogenase | SAMN04488090_4049 | Not Available | Positive | 4975301 - 4976311 | 36803.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
