Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_4030 | Not Available | Negative | 4948159 - 4948767 | 22912.1 |
| hypothetical protein | SAMN04488090_4031 | Not Available | Negative | 4948780 - 4949781 | 37575.8 |
| hypothetical protein | SAMN04488090_4032 | Not Available | Positive | 4949905 - 4950414 | 18680.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488090_4033 | Not Available | Negative | 4950443 - 4951687 | 47288.9 |
| hypothetical protein | SAMN04488090_4034 | Not Available | Positive | 4951848 - 4952300 | 17322.9 |
| hemoglobin | SAMN04488090_4035 | Not Available | Positive | 4952401 - 4952889 | 17280.0 |
| glutamyl-trna reductase | SAMN04488090_4036 | Not Available | Positive | 4953164 - 4954432 | 47677.9 |
| transcriptional regulator, arac family | SAMN04488090_4037 | Not Available | Negative | 4954715 - 4955578 | 33065.1 |
| d-psicose/d-tagatose/l-ribulose 3-epimerase | SAMN04488090_4038 | Not Available | Positive | 4955701 - 4956552 | 31870.9 |
| predicted dehydrogenase | SAMN04488090_4039 | Not Available | Positive | 4956574 - 4957698 | 41774.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
