Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00159 family protein | SAMN04488090_4020 | Not Available | Negative | 4936837 - 4937631 | 29765.8 |
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN04488090_4021 | Not Available | Negative | 4937840 - 4939876 | 74132.6 |
| hypothetical protein | SAMN04488090_4022 | Not Available | Negative | 4939883 - 4940356 | 17843.7 |
| methylmalonyl-coa mutase | SAMN04488090_4023 | Not Available | Negative | 4940435 - 4941517 | 39090.1 |
| chromosomal replication initiator protein dnaa | SAMN04488090_4024 | Not Available | Positive | 4941737 - 4943176 | 54777.8 |
| hypothetical protein | SAMN04488090_4025 | Not Available | Positive | 4943196 - 4944140 | 36103.0 |
| protein of unknown function | SAMN04488090_4026 | Not Available | Negative | 4944143 - 4944961 | 31493.7 |
| predicted aminopeptidase | SAMN04488090_4027 | Not Available | Negative | 4945042 - 4946088 | 40995.8 |
| recombination protein reca | SAMN04488090_4028 | Not Available | Positive | 4946307 - 4947377 | 38260.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_4029 | Not Available | Negative | 4947417 - 4948157 | 26806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
