Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted acyltransferase | SAMN04488090_4010 | Not Available | Positive | 4927812 - 4928963 | 42721.1 |
| beta-aspartyl-peptidase (threonine type) | SAMN04488090_4011 | Not Available | Positive | 4929089 - 4930135 | 36827.4 |
| hypothetical protein | SAMN04488090_4012 | Not Available | Negative | 4930195 - 4930494 | 11027.8 |
| regulatory protein, luxr family | SAMN04488090_4013 | Not Available | Positive | 4930534 - 4931295 | 29254.2 |
| hypothetical protein | SAMN04488090_4014 | Not Available | Negative | 4931301 - 4931696 | 14379.4 |
| hypothetical protein | SAMN04488090_4015 | Not Available | Positive | 4931761 - 4932288 | 19675.8 |
| aquaporin z | SAMN04488090_4016 | Not Available | Positive | 4932422 - 4933099 | 22810.9 |
| acyl-coa reductase | SAMN04488090_4017 | Not Available | Negative | 4933271 - 4934893 | 60027.3 |
| protein of unknown function | SAMN04488090_4018 | Not Available | Negative | 4935037 - 4935339 | 12056.2 |
| deoxyribodipyrimidine photo-lyase | SAMN04488090_4019 | Not Available | Positive | 4935530 - 4936840 | 51110.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
