Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family with amidase-like domain | SAMN04488090_0392 | Not Available | Negative | 527253 - 528224 | 36690.3 |
| hypothetical protein | SAMN04488090_0393 | Not Available | Negative | 528283 - 529095 | 33119.1 |
| hypothetical protein | SAMN04488090_0394 | Not Available | Negative | 529096 - 529953 | 34011.0 |
| hypothetical protein | SAMN04488090_0395 | Not Available | Positive | 530078 - 530479 | 15010.7 |
| doxx-like family protein | SAMN04488090_0396 | Not Available | Positive | 530506 - 530874 | 13639.2 |
| hypothetical protein | SAMN04488090_0397 | Not Available | Positive | 530871 - 531083 | 8351.25 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488090_0398 | Not Available | Positive | 531096 - 531539 | 16577.7 |
| dihydrofolate reductase | SAMN04488090_0399 | Not Available | Positive | 531581 - 532111 | 19108.9 |
| hypothetical protein | SAMN04488090_0400 | Not Available | Positive | 532177 - 532410 | 8655.23 |
| histidine kinase | SAMN04488090_0401 | Not Available | Positive | 532686 - 533357 | 24909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
