Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN04488090_4000 | Not Available | Positive | 4914189 - 4915187 | 36498.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488090_4001 | Not Available | Positive | 4915220 - 4916395 | 42911.9 |
| hypothetical protein | SAMN04488090_4002 | Not Available | Positive | 4916405 - 4918702 | 86532.7 |
| hypothetical protein | SAMN04488090_4003 | Not Available | Negative | 4918867 - 4919754 | 33988.1 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04488090_4004 | Not Available | Negative | 4919898 - 4921514 | 59735.8 |
| l-iditol 2-dehydrogenase | SAMN04488090_4005 | Not Available | Negative | 4921750 - 4922769 | 36364.6 |
| 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase | SAMN04488090_4006 | Not Available | Negative | 4922784 - 4923482 | 24538.9 |
| solute:na+ symporter, sss family | SAMN04488090_4007 | Not Available | Negative | 4923517 - 4925061 | 56023.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488090_4008 | Not Available | Negative | 4925117 - 4926061 | 35221.2 |
| purple acid phosphatase, n-terminal domain | SAMN04488090_4009 | Not Available | Positive | 4926355 - 4927740 | 52060.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
