Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3990 | Not Available | Positive | 4902212 - 4903726 | 57079.9 |
| putative colanic acid biosynthesis acetyltransferase wcab | SAMN04488090_3991 | Not Available | Positive | 4903727 - 4904209 | 17446.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_3992 | Not Available | Positive | 4904219 - 4905292 | 40134.3 |
| polymer biosynthesis protein, wecb/taga/cpsf family | SAMN04488090_3993 | Not Available | Positive | 4905306 - 4906055 | 28534.7 |
| mannan endo-1,4-beta-mannosidase | SAMN04488090_3994 | Not Available | Positive | 4906105 - 4907208 | 42523.5 |
| capsule assembly protein wzi | SAMN04488090_3995 | Not Available | Negative | 4907210 - 4908694 | 54480.7 |
| mannose-1-phosphate guanylyltransferase | SAMN04488090_3996 | Not Available | Negative | 4908796 - 4909869 | 40333.2 |
| pa domain-containing protein | SAMN04488090_3997 | Not Available | Negative | 4910423 - 4911934 | 54646.0 |
| adenylate cyclase | SAMN04488090_3998 | Not Available | Negative | 4912023 - 4913324 | 47925.5 |
| protein of unknown function | SAMN04488090_3999 | Not Available | Positive | 4913460 - 4913984 | 19287.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
