Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_3970 | Not Available | Negative | 4881350 - 4882027 | 26875.9 |
| conserved hypothetical protein | SAMN04488090_3971 | Not Available | Positive | 4882056 - 4883924 | 69551.0 |
| hypothetical protein | SAMN04488090_3972 | Not Available | Positive | 4883970 - 4884167 | 7856.43 |
| hypothetical protein | SAMN04488090_3973 | Not Available | Positive | 4884439 - 4884705 | 10373.5 |
| choline dehydrogenase | SAMN04488090_3974 | Not Available | Negative | 4884769 - 4886478 | 63080.0 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488090_3975 | Not Available | Negative | 4886573 - 4887145 | 20763.0 |
| homoserine o-acetyltransferase | SAMN04488090_3976 | Not Available | Negative | 4887535 - 4888890 | 51013.6 |
| hypothetical protein | SAMN04488090_3977 | Not Available | Negative | 4888898 - 4889155 | 9911.96 |
| o-acetylhomoserine sulfhydrylase | SAMN04488090_3978 | Not Available | Negative | 4889198 - 4890502 | 46950.6 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04488090_3979 | Not Available | Positive | 4891018 - 4891650 | 21571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
