Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3939 | Not Available | Negative | 4847602 - 4848261 | 23574.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_3940 | Not Available | Negative | 4848242 - 4848784 | 21318.5 |
| putative membrane protein | SAMN04488090_3941 | Not Available | Positive | 4848918 - 4849280 | 13151.5 |
| hypothetical protein | SAMN04488090_3942 | Not Available | Positive | 4849346 - 4850127 | 28633.8 |
| hypothetical protein | SAMN04488090_3943 | Not Available | Positive | 4850473 - 4850615 | 5258.34 |
| tpr repeat-containing protein | SAMN04488090_3944 | Not Available | Negative | 4850595 - 4851455 | 31511.8 |
| phospholipase c | SAMN04488090_3945 | Not Available | Negative | 4851538 - 4853985 | 93054.4 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488090_3946 | Not Available | Positive | 4854139 - 4854501 | 13596.3 |
| tryptophan synthase beta chain | SAMN04488090_3947 | Not Available | Negative | 4854580 - 4855941 | 49500.4 |
| hypothetical protein | SAMN04488090_3948 | Not Available | Positive | 4856086 - 4858149 | 78974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
