Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase, lipoprotein e(p4) family | SAMN04488090_3889 | Not Available | Positive | 4788952 - 4789749 | 29915.5 |
| hypothetical protein | SAMN04488090_3890 | Not Available | Positive | 4789830 - 4791146 | 47538.8 |
| transcriptional regulator, hxlr family | SAMN04488090_3891 | Not Available | Negative | 4791079 - 4791435 | 13957.1 |
| hypothetical protein | SAMN04488090_3892 | Not Available | Positive | 4791528 - 4792400 | 31410.3 |
| hypothetical protein | SAMN04488090_3893 | Not Available | Positive | 4792566 - 4792817 | 9571.87 |
| calcineurin-like phosphoesterase | SAMN04488090_3894 | Not Available | Positive | 4792829 - 4794400 | 58113.5 |
| hypothetical protein | SAMN04488090_3895 | Not Available | Negative | 4794477 - 4795160 | 25912.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488090_3896 | Not Available | Negative | 4795313 - 4796379 | 39323.6 |
| hypothetical protein | SAMN04488090_3897 | Not Available | Positive | 4796380 - 4797492 | 39877.9 |
| imidazole glycerol phosphate synthase subunit hish | SAMN04488090_3898 | Not Available | Positive | 4797676 - 4798263 | 21679.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
