Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04488090_3879 | Not Available | Negative | 4774733 - 4775728 | 36291.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_3880 | Not Available | Negative | 4775741 - 4777264 | 56288.8 |
| hypothetical protein | SAMN04488090_3881 | Not Available | Negative | 4777337 - 4780051 | 101696.0 |
| hypothetical protein | SAMN04488090_3882 | Not Available | Positive | 4780142 - 4780663 | 17785.3 |
| p pilus assembly protein, chaperone papd | SAMN04488090_3883 | Not Available | Positive | 4780772 - 4781575 | 29577.9 |
| hypothetical protein | SAMN04488090_3884 | Not Available | Positive | 4781572 - 4782075 | 17740.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_3885 | Not Available | Positive | 4782155 - 4782739 | 22624.0 |
| fecr family protein | SAMN04488090_3886 | Not Available | Positive | 4782830 - 4783783 | 36061.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_3887 | Not Available | Positive | 4783899 - 4787258 | 122735.0 |
| starch-binding associating with outer membrane | SAMN04488090_3888 | Not Available | Positive | 4787262 - 4788779 | 57528.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
