Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l33 | SAMN04488090_3859 | Not Available | Negative | 4751631 - 4751813 | 6998.71 |
| dna replication and repair protein reco | SAMN04488090_3860 | Not Available | Negative | 4751926 - 4752603 | 26240.9 |
| uncharacterized conserved protein, duf1501 family | SAMN04488090_3861 | Not Available | Negative | 4752650 - 4753840 | 44861.9 |
| uncharacterized conserved protein, duf1800 family | SAMN04488090_3862 | Not Available | Negative | 4753844 - 4755268 | 54187.8 |
| glycosyl hydrolases family 16 | SAMN04488090_3863 | Not Available | Positive | 4755411 - 4756220 | 30940.4 |
| hypothetical protein | SAMN04488090_3864 | Not Available | Negative | 4756366 - 4757541 | 45814.0 |
| cysteinyl-trna synthetase | SAMN04488090_3865 | Not Available | Positive | 4757810 - 4759300 | 57051.2 |
| peptidase family m28 | SAMN04488090_3866 | Not Available | Positive | 4759347 - 4760360 | 36971.6 |
| hypothetical protein | SAMN04488090_3867 | Not Available | Positive | 4760429 - 4760839 | 15579.8 |
| cbs domain-containing protein | SAMN04488090_3868 | Not Available | Negative | 4760946 - 4761380 | 16056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
