Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxychorismate lyase | SAMN04488090_3849 | Not Available | Negative | 4743498 - 4744097 | 22916.3 |
| aminodeoxychorismate synthase, subunit i | SAMN04488090_3850 | Not Available | Negative | 4744097 - 4745080 | 37432.7 |
| dtdp-4-dehydrorhamnose reductase | SAMN04488090_3851 | Not Available | Negative | 4745104 - 4746018 | 33436.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488090_3852 | Not Available | Negative | 4746066 - 4746764 | 25604.1 |
| hydroxymethylbilane synthase | SAMN04488090_3853 | Not Available | Negative | 4746773 - 4747696 | 33698.5 |
| dna polymerase-3 subunit delta' | SAMN04488090_3854 | Not Available | Negative | 4747710 - 4748831 | 42014.7 |
| transcriptional regulator, asnc family | SAMN04488090_3855 | Not Available | Positive | 4749235 - 4749708 | 17551.4 |
| catechol 2,3-dioxygenase | SAMN04488090_3856 | Not Available | Positive | 4749794 - 4750222 | 16160.6 |
| signal recognition particle-docking protein ftsy | SAMN04488090_3857 | Not Available | Negative | 4750274 - 4751254 | 35458.6 |
| protein of unknown function | SAMN04488090_3858 | Not Available | Negative | 4751374 - 4751526 | 5436.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
