Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcineurin-like phosphoesterase | SAMN04488090_3839 | Not Available | Negative | 4734659 - 4735324 | 25539.9 |
| hypothetical protein | SAMN04488090_3840 | Not Available | Negative | 4735328 - 4736554 | 48121.8 |
| hypoxanthine phosphoribosyltransferase | SAMN04488090_3841 | Not Available | Positive | 4736731 - 4737267 | 20002.4 |
| transcriptional regulator, deor family | SAMN04488090_3842 | Not Available | Negative | 4737269 - 4738027 | 27507.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488090_3843 | Not Available | Positive | 4738249 - 4738731 | 17285.0 |
| membrane dipeptidase | SAMN04488090_3844 | Not Available | Positive | 4738736 - 4739806 | 39742.1 |
| acyl-coa thioester hydrolase | SAMN04488090_3845 | Not Available | Negative | 4739852 - 4740376 | 20782.6 |
| nadh dehydrogenase subunit d | SAMN04488090_3846 | Not Available | Negative | 4740404 - 4741618 | 46365.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04488090_3847 | Not Available | Negative | 4741871 - 4742680 | 30673.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488090_3848 | Not Available | Positive | 4742829 - 4743503 | 25417.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
