Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN04488090_3829 | Not Available | Negative | 4725191 - 4727092 | 72746.7 |
| hypothetical protein | SAMN04488090_3830 | Not Available | Positive | 4727348 - 4727668 | 11612.8 |
| hypothetical protein | SAMN04488090_3831 | Not Available | Positive | 4727682 - 4727864 | 6979.13 |
| hypothetical protein | SAMN04488090_3832 | Not Available | Positive | 4727914 - 4728360 | 16738.9 |
| hypothetical protein | SAMN04488090_3833 | Not Available | Positive | 4728350 - 4728862 | 19494.4 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN04488090_3834 | Not Available | Negative | 4728904 - 4729602 | 25835.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_3835 | Not Available | Positive | 4729911 - 4730495 | 23063.2 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04488090_3836 | Not Available | Negative | 4730741 - 4733044 | 86852.4 |
| bleomycin hydrolase | SAMN04488090_3837 | Not Available | Positive | 4733209 - 4734318 | 41117.6 |
| ycii-related domain-containing protein | SAMN04488090_3838 | Not Available | Negative | 4734315 - 4734611 | 10933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
