Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04488090_3819 | Not Available | Negative | 4714716 - 4715750 | 39208.6 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN04488090_3820 | Not Available | Negative | 4715790 - 4716485 | 26606.0 |
| cell division gtpase ftsz | SAMN04488090_3821 | Not Available | Positive | 4716700 - 4717605 | 31997.9 |
| hypothetical protein | SAMN04488090_3822 | Not Available | Positive | 4717923 - 4718120 | 7305.02 |
| fatty-acyl-coa synthase | SAMN04488090_3823 | Not Available | Positive | 4718170 - 4719819 | 60757.2 |
| hypothetical protein | SAMN04488090_3824 | Not Available | Positive | 4719902 - 4721029 | 40496.6 |
| hypothetical protein | SAMN04488090_3825 | Not Available | Positive | 4721056 - 4721637 | 21027.8 |
| wd40-like beta propeller repeat | SAMN04488090_3826 | Not Available | Positive | 4721667 - 4723280 | 59147.9 |
| cystathionine gamma-synthase | SAMN04488090_3827 | Not Available | Positive | 4723280 - 4724419 | 40865.0 |
| protein of unknown function | SAMN04488090_3828 | Not Available | Positive | 4724567 - 4725127 | 21311.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
