Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | SAMN04488090_3788 | Not Available | Positive | 4679967 - 4680425 | 16300.2 |
| surface polysaccharide o-acyltransferase, integral membrane enzyme | SAMN04488090_3789 | Not Available | Positive | 4680560 - 4681687 | 42776.2 |
| hypothetical protein | SAMN04488090_3790 | Not Available | Negative | 4681803 - 4682663 | 31190.5 |
| isopenicillin n synthase | SAMN04488090_3791 | Not Available | Negative | 4682802 - 4683785 | 36811.8 |
| transcriptional regulator, arac family | SAMN04488090_3792 | Not Available | Positive | 4683882 - 4684739 | 33866.3 |
| protein of unknown function | SAMN04488090_3793 | Not Available | Positive | 4684844 - 4685254 | 15840.4 |
| hypothetical protein | SAMN04488090_3794 | Not Available | Negative | 4685365 - 4685586 | 7490.79 |
| superoxide dismutase, fe-mn family | SAMN04488090_3795 | Not Available | Negative | 4685761 - 4686432 | 24712.2 |
| hypothetical protein | SAMN04488090_3796 | Not Available | Positive | 4686639 - 4686773 | 5037.22 |
| multidrug efflux pump subunit acrb | SAMN04488090_3797 | Not Available | Positive | 4687030 - 4690230 | 116691.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
