Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3758 | Not Available | Negative | 4639654 - 4640328 | 25769.8 |
| hypothetical protein | SAMN04488090_3759 | Not Available | Negative | 4640371 - 4640718 | 12356.9 |
| gmp synthase (glutamine-hydrolysing) | SAMN04488090_3760 | Not Available | Negative | 4640806 - 4642338 | 56602.1 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488090_3761 | Not Available | Negative | 4642396 - 4643559 | 42504.1 |
| lipoprotein-releasing system permease protein | SAMN04488090_3762 | Not Available | Positive | 4643758 - 4644996 | 46877.3 |
| phosphonatase-like hydrolase | SAMN04488090_3763 | Not Available | Negative | 4645163 - 4645885 | 26600.7 |
| hypothetical protein | SAMN04488090_3764 | Not Available | Positive | 4646149 - 4647399 | 46280.7 |
| transcriptional regulator, xre family with cupin sensor | SAMN04488090_3765 | Not Available | Positive | 4647433 - 4648014 | 22286.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_3766 | Not Available | Positive | 4648182 - 4651409 | 119637.0 |
| starch-binding associating with outer membrane | SAMN04488090_3767 | Not Available | Positive | 4651415 - 4652983 | 58717.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
