Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine dipeptidase | SAMN04488090_3738 | Not Available | Negative | 4618936 - 4619595 | 25343.5 |
| spore maturation protein spma | SAMN04488090_3739 | Not Available | Positive | 4619749 - 4620984 | 44516.7 |
| phosphoribosylanthranilate isomerase | SAMN04488090_3740 | Not Available | Negative | 4621380 - 4621964 | 21458.9 |
| chromate transporter | SAMN04488090_3741 | Not Available | Positive | 4622131 - 4623348 | 44688.7 |
| hypothetical protein | SAMN04488090_3742 | Not Available | Negative | 4623467 - 4623835 | 13202.9 |
| hypothetical protein | SAMN04488090_3743 | Not Available | Negative | 4623950 - 4624159 | 8108.37 |
| dihydroneopterin aldolase | SAMN04488090_3744 | Not Available | Negative | 4624198 - 4624548 | 13274.9 |
| cell division initiation protein | SAMN04488090_3745 | Not Available | Negative | 4624579 - 4625274 | 26382.0 |
| wd-40 repeat-containing protein | SAMN04488090_3746 | Not Available | Negative | 4625420 - 4626325 | 33175.4 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN04488090_3747 | Not Available | Positive | 4626448 - 4627092 | 24816.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
